A system includes a build system processor configured to generate a private encryption key and configured to add the private encryption key to at least one of a plurality of source files. Each of the plurality of source files includes instructions configured to be executed by an industrial controller processor. The processor is also configured to generate a plurality of binary files from the plurality of source files. The processor is further configured to construct a whitelist file including first hash key values determined for the plurality of binary files and configured to encrypt the whitelist file using the private key to provide an encrypted whitelist file.