A fluidic assay system assembly comprising: (a) a disposable fluidic cartridge (1) comprising at least one reaction chamber (3) connected to a network of fluidic channels (2) with at least one inlet channel and one outlet channel. The said inlet and outlet channels end at the down side of the fluidic cartridge with at least two connecting pores (4), (4′); (b) a disposable vessel (5) comprising a connection tube (22) immersed in a sample container (6) and ended at the cap of the vessel with an external connection pore (7); (c) a fluidic manifold (8) that is interdependent with the bulk system (12) comprising a fluidic network connected (9) to active fluidic parts (10), (11). The said channel network ends at the top side of the fluidic manifold with at least one connecting pore (13). Wherein the first and the second pores of the fluidic cartridge are interfaced by direct physical contact with the sample container and the manifold pores, respectively.