A flange bolt alignment system has an emitting unit including a beam emitting assembly adapted to emit an incident light beam and a beam reflecting assembly having a pivoting beam reflecting element continually oriented along a vertical axis by gravity; and a light reflecting surface on the beam reflecting element, the light reflecting surface positioned to receive the incident light beam and reflect a reflected light beam along a horizontal axis; and a receiving unit adapted for positioning in adjacent, spaced-apart relationship to the emitting unit. A flange bolt alignment method is also disclosed.