An acoustic control system wirelessly operates a subsea latching assembly or other subsea device, such as an active seal. The acoustic control system may control a subsea first accumulator to release its stored hydraulic fluid to operate the latch assembly or other subsea device, such as an active seal. An RCD or other oilfield device may be unlatched or latched with the latching assembly. The acoustic control system may have a surface control unit, a subsea control unit, and two or more acoustic signal devices. A valve may allow switching from an umbilical line system to the acoustic control system accumulator.