A storage control system, and a method of operation thereof, including: a host interface module for receiving a host command from a host system; a power measurement module, coupled to the host interface module, for reading a current value of an electrical power supplied by the host system in response to the host command; and a schedule module, coupled to the power measurement module, for scheduling new operations to be executed in parallel in non-volatile memory devices, the new operations are scheduled when the current value of the electrical power does not exceed a power limit.