Systems and methods for the manipulation of captured light fields and captured light field image data in accordance with embodiments of the invention are disclosed. In one embodiment of the invention, a system for manipulating captured light field image data includes a processor, a display, a user input device, and a memory, wherein a depth map includes depth information for one or more pixels in the image data, and wherein an image manipulation application configures the processor to display a first synthesized image, receive user input data identifying a region within the first synthesized image, determine boundary data for the identified region using the depth map, receive user input data identifying at least one action, and perform the received action using the boundary data and the captured light field image data.