A method and system for measuring end-to-end processing delay of the RE between an input interface and a transmit port in the downlink direction and a receive port and an output interface on the uplink direction is disclosed. The method and system if for use in a radio equipment node (RE) connected to a radio equipment control node (REC). Once the downlink and uplink radio channels are activated at a predetermined carrier frequency, a chirp sine wave is added at the input interface and the receive port such that the chirp sine wave becomes mixed with the carrier frequency. Sampling of a received downlink mixed signal is done at the transmit port and of the received uplink mixed signal at the output interface. The sampled mixed signals are then cross-correlated with a reference chirped sine wave to obtain a signal phase shift which is then converted to obtain a time delay associated with the end-to-end processing delay of the RE.