The present disclosure relates to controllers of linear motion devices and control methods of the same, in particular, to a controller of a linear motion device and a control method of the same capable of controlling the position of the linear motion device accurately, in a case where a misalignment of the mounting position of a magnetic sensor or a magnetizing variation of a magnet occurs, or in a case where a magnetic field detected by the magnetic sensor receives an interference of the magnetic field generated by a driving coil of the linear motion device.