A system for augmented pilot operations is provided to perform checks and balances between navigable systems and a plurality of controlling parties of a Fly-By-Wire vehicle. A ground based control system having at least one of manual controls and an autonomous piloting system, an electronic communication system including at least one of an onboard communication system, a ground based communication system, and a programmable interface for inter party communication. An on board flight control system including at least one of a primary power unit, manual flight controls, and a programmable flight management system may be provided. An onboard auxiliary navigation system including at least one of an auxiliary power control unit, a ground operated control/navigation unit, a physical barrier may prevent manual override from within the plane or cockpit, and an assignment device. A disagreement detection system may be configured to detect unauthorized use of the Fly-By-Wire vehicle.