An engine control system includes an engine calibration module that sets fuel injection timing based on one of N cetane number (CN) values, wherein N is an integer greater than one. A combustion noise module generates a combustion noise signal based on cylinder pressure in a compression ignition (CI) engine during combustion. A fuel quality determination module compares the combustion noise signal to N predetermined combustion noise levels corresponding to the N CN values, and that selects the one of the N CN values based on the comparison.