A method for outputting a combined power source alarm for an implantable blood pump includes determining a status for each of first and second power sources of the blood pump. A combined power source alarm based on the statuses of the first and second power sources is outputted. A method for generating an alarm based on fault detections in a mechanically assisted circulation system includes processing a series of fault detection indications to classify a fault as active or inactive. An alarm is generated if the fault is active for more than a predetermined amount of time.