A propulsion system for a supersonic aircraft includes an engine including an engine core and an engine bypass, a compression surface upstream of the engine, a shroud surrounding the engine configured to direct airflow passing over the compression surface towards the engine, and a plurality of vortex generators positioned upstream of the engine. The vortex generators have a height such that when the supersonic aircraft is flown at a predetermined altitude and predetermined speed, the plurality of vortex generators create vortices that propagate partially outside of a boundary layer formed proximate a surface of a supersonic inlet. The vortices cause a high-velocity portion of the airflow to move towards the engine core and a low-velocity portion of the airflow to move towards the engine bypass. The plurality of vortex generators are disposed aft of a terminal shock and have a height greater than the thickness of the boundary layer.