An object of this invention is to provide a job processing method for a convenient printing system applicable not only to the office environment but also to the POD environment, a storage medium, a program, a printing system, and a printing apparatus. To accomplish this, according to a job processing method for a printing system in which print media detected by a multi feed detection unit for detecting occurrence of multi feed of overlapping print media can be used as print media necessary for a job to be processed by a printing apparatus, when multi feed occurs, the printing system can execute a recovery operation for an unprinted job without outputting multi-fed print media to a print medium discharge destination necessary for the unprinted job in the printing system.