A system and method for merging changed elements in a software development environment is provided, in which the software development environment is provided with a set of at least one defect, comprising at least one changed element, associated with a software project that comprises a plurality of elements, the software project comprising a plurality of elements. The environment first obtains a list of changed elements in a defect record, for example from a defect database, and for each changed element in the list, attempts an automated merge of the changed element with a corresponding target. If any attempt fails, the environment may re-attempt the merge for any failed attempt, and may invoke a user interface for resolving the merge manually.