For a design under test (DUT) that is to be emulated, a host system partitions the DUT into multiple partitions and maps each partition to an FPGA of an emulator which will emulate the partition. The host system stores information describing to which FPGAs each component of the DUT has been mapped. Additionally, mapped to each FPGA is trace and injection logic that traces signals exchanged by the FPGA with other FPGAs during emulation of the DUT. After the emulation of the DUT is complete, if a user wishes to debug a component of the DUT, the FPGAs that are configured to emulate the component are identified. For each identified FPGA, the trace and injection logic injects previously traced signals into the logic of the FPGA in order to reemulate the component. The host system generates waveforms for the user that include signals traced during the reemulation of the component.