Methods and systems of pre-balancing a switched capacitor converter are provided. A first comparator includes a positive input configured to receive a voltage across an output capacitor and a negative input configured to receive a first hysteresis voltage. A second comparator includes a positive input configured to receive a voltage across an input capacitor of the switched capacitor converter and a negative input configured to receive a second hysteresis voltage. A first current source is coupled between the output capacitor and GND and is configured to discharge the output capacitor upon determining that the voltage across the output capacitor is above a tolerance provided by the first hysteresis voltage. A second current source is coupled between the input capacitor and GND and is configured to discharge the input capacitor upon determining that the voltage across the input capacitor is above a tolerance provided by the second hysteresis voltage.