Navigation satellite receivers have a large number of channels, where phase discriminators and loop filter of a PLL operate in phase with data bits and control of numerically controlled oscillator (NCO) carried out simultaneously on all channels. Since symbol boundaries for different satellites do not match, there is a variable time delay between the generation of control signals and NCO control time. This delay may be measured by counting a number of samples in the delay interval. A proposed system measures non-energy parameters of the BPSK-signal carrier received in additive mixture with noise when a digital loop filter of PLL controls NCO with a constant or changing in time delay. A control unit controls bandwidth and a LF order by changing transfer coefficients based on analyzing estimated signal parameters and phase tracking error at a PD output.