A fan vibration absorbing structure includes a bearing cup and a vibration absorbing element. The bearing cup includes a first section, a second section and a bearing holding hole. The first and the second section are connected end-to-end to enclose a receiving space therein, which communicates with the bearing holding hole. The vibration absorbing element is fitted between the first and the second section. With the fan vibration absorbing structure included in a fan, it is able to largely reduce the vibration occurred during fan operation.