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公开(公告)号:US11078528B2
公开(公告)日:2021-08-03
申请号:US15291054
申请日:2016-10-11
Applicant: Advanced Cell Diagnostics, Inc.
Inventor: Yuling Luo , Xingyong Wu , Liuliu Pan , Xiaoming Wang , Xiao-Jun Ma , Nan Su , Steve Chen
IPC: C12Q1/68 , C12Q1/6841 , C12Q1/682 , C12Q1/6827
Abstract: The invention relates to methods of in situ detection of a nucleic acid variation of a target nucleic acid in a sample, including single nucleotide variations, multi-nucleotide variations or splice sites. The method can comprise the steps of contacting the sample with a probe that detects the nucleic acid variation or splice site and a neighbor probe; contacting the sample with pre-amplifiers that bind to the nucleic acid variation probe or splice site probe and neighbor probe, respectively; contacting the sample with a collaboration amplifier that binds to the pre-amplifiers; and contacting the sample with a label probe system, wherein hybridization of the components forms a signal generating complex (SGC) comprising a target nucleic acid with the nucleic acid variation or splice site, the probes and amplifiers; and detecting in situ signal from the SGC on the sample. The invention also provides samples, tissue slides, and kits relating to detection of nucleic acid variations, including single nucleotide variations, multi-nucleotide variations or splice sites, of a target nucleic acid.
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2.
公开(公告)号:US09315854B2
公开(公告)日:2016-04-19
申请号:US14151716
申请日:2014-01-09
Applicant: Advanced Cell Diagnostics, Inc.
Inventor: Xingyong Wu , Huei-Yu Fay Wang , Nan Su , Li-Chong Wang , Yuling Luo
IPC: C12Q1/68 , C12Q1/00 , G01N33/53 , C12Q1/28 , C12P19/34 , C12M1/34 , G01N31/22 , C07H21/02 , C07H21/04
CPC classification number: C12Q1/6841 , C12Q1/6818 , C12Q1/682 , C12Q2563/131 , C12Q2537/143 , C12Q2537/125
Abstract: Disclosed is a method for in situ detection of one or more target nucleic acids based on a combination of an in situ hybridization (ISH) assay method and a general ISH signal amplification method. This new method produces high signal intensity and while keeps low background noise of signal amplification. The result can be consistently reproduced and the method can be easily adopted for routine clinic diagnostic use. Further, the invention relates to a kit, comprising the components of the ISH assay and a general ISH signal amplification assay, for sensitive detection of one or more target nucleic acids.
Abstract translation: 公开了一种基于原位杂交(ISH)测定方法和一般ISH信号扩增方法的组合原位检测一种或多种靶核酸的方法。 这种新方法产生高信号强度,同时保持低信号放大的背景噪声。 结果可以一贯重现,该方法可以方便地用于常规诊所诊断。 此外,本发明涉及一种试剂盒,其包含用于敏感检测一种或多种靶核酸的ISH测定和一般ISH信号扩增测定的组分。
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公开(公告)号:US20230143970A1
公开(公告)日:2023-05-11
申请号:US18046775
申请日:2022-10-14
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Shiping Chen , Yuling Luo
IPC: C12Q1/6837 , C12Q1/682 , C12Q1/6841
CPC classification number: C12Q1/6837 , C12Q1/682 , C12Q1/6841
Abstract: Methods of detecting multiple nucleic acid targets in single cells through indirect capture of labels to the nucleic acids are provided. Methods of assaying the relative levels of nucleic acid targets through normalization to levels of reference nucleic acids are also provided. Methods of detecting individual cells, particularly rare cells from large heterogeneous cell populations, through detection of nucleic acids are described. Related compositions, systems, and kits are also provided.
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公开(公告)号:US20210395806A1
公开(公告)日:2021-12-23
申请号:US17362828
申请日:2021-06-29
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Yuling Luo , Xingyong Wu , Liuliu Pan , Xiaoming Wang , Xiao-Jun Ma , Nan Su , Steve Chen
IPC: C12Q1/6841 , C12Q1/682 , C12Q1/6827
Abstract: The invention relates to methods of in situ detection of a nucleic acid variation of a target nucleic acid in a sample, including single nucleotide variations, multi-nucleotide variations or splice sites. The method can comprise the steps of contacting the sample with a probe that detects the nucleic acid variation or splice site and a neighbor probe; contacting the sample with pre-amplifiers that bind to the nucleic acid variation probe or splice site probe and neighbor probe, respectively; contacting the sample with a collaboration amplifier that binds to the pre-amplifiers; and contacting the sample with a label probe system, wherein hybridization of the components forms a signal generating complex (SGC) comprising a target nucleic acid with the nucleic acid variation or splice site, the probes and amplifiers; and detecting in situ signal from the SGC on the sample. The invention also provides samples, tissue slides, and kits relating to detection of nucleic acid variations, including single nucleotide variations, multi-nucleotide variations or splice sites, of a target nucleic acid.
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公开(公告)号:US20210032689A1
公开(公告)日:2021-02-04
申请号:US16996180
申请日:2020-08-18
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Yuling Luo , Shiping Chen , Huei-Yu Fay Wang , John James Flanagan
IPC: C12Q1/6841
Abstract: Methods of detecting multiple nucleic acid targets in single cells through indirect capture of labels to the nucleic acids are provided. Methods of assaying the relative levels of nucleic acid targets through normalization to levels of reference nucleic acids are also provided. Methods of detecting individual cells, particularly rare cells from large heterogeneous cell populations, through detection of nucleic acids are described. Related compositions, systems, and kits are also provided.
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6.
公开(公告)号:US20190203276A1
公开(公告)日:2019-07-04
申请号:US16294864
申请日:2019-03-06
Applicant: Advanced Cell Diagnostics, Inc.
Inventor: Yuling Luo , Shiping Chen
IPC: C12Q1/6837 , C12Q1/682 , C12Q1/6841
CPC classification number: C12Q1/6837 , C12Q1/682 , C12Q1/6841 , C12Q2537/143 , C12Q2537/125 , C12Q2565/543 , C12Q2525/313
Abstract: Methods of detecting multiple nucleic acid targets in single cells through indirect capture of labels to the nucleic acids are provided. Methods of assaying the relative levels of nucleic acid targets through normalization to levels of reference nucleic acids are also provided. Methods of detecting individual cells, particularly rare cells from large heterogeneous cell populations, through detection of nucleic acids are described. Related compositions, systems, and kits are also provided.
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公开(公告)号:US20240392355A1
公开(公告)日:2024-11-28
申请号:US18789872
申请日:2024-07-31
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Yuling Luo , Xingyong Wu , Liuliu Pan , Xiaoming Wang , Xiao-Jun Ma , Nan Su , Steve Chen
IPC: C12Q1/6841 , C12Q1/682 , C12Q1/6827
Abstract: The invention relates to methods of in situ detection of a nucleic acid variation of a target nucleic acid in a sample, including single nucleotide variations, multi-nucleotide variations or splice sites. The method can comprise the steps of contacting the sample with a probe that detects the nucleic acid variation or splice site and a neighbor probe; contacting the sample with pre-amplifiers that bind to the nucleic acid variation probe or splice site probe and neighbor probe, respectively; contacting the sample with a collaboration amplifier that binds to the pre-amplifiers; and contacting the sample with a label probe system, wherein hybridization of the components forms a signal generating complex (SGC) comprising a target nucleic acid with the nucleic acid variation or splice site, the probes and amplifiers; and detecting in situ signal from the SGC on the sample. The invention also provides samples, tissue slides, and kits relating to detection of nucleic acid variations, including single nucleotide variations, multi-nucleotide variations or splice sites, of a target nucleic acid.
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8.
公开(公告)号:US11788124B2
公开(公告)日:2023-10-17
申请号:US17046228
申请日:2019-04-08
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Yuling Luo , Xiao-Jun Ma , Steve Chen , Nan Su , Emerald Doolittle , Bingqing Zhang , Xiaoming Wang , Xingyong Wu , Xiao Yan Pimentel , Helen Jarnagin
IPC: C07H21/02 , C12Q1/6841 , C12Q1/682 , C12Q1/6876
CPC classification number: C12Q1/6841 , C12Q1/682 , C12Q1/6876 , C12Q2543/10
Abstract: The present invention relates to detection of nucleic acids and provides a composition comprising a Signal Generating Complex, wherein the composition comprises: (A) a pair of target probes (TPs), wherein a first TP of the pair of TPs comprises a nucleic acid sequence comprising two segments; (B) a pair of base PPAs comprising the first and second base PPAs, wherein the first base PPA comprises a nucleic acid sequence comprising three segments; (C) a set of extension PPAs comprising the first and second extension PPAs, wherein the first extension PPA comprises a nucleic acid sequence comprising two segments; (D) a plurality of pre-amplifiers (PAs), wherein the PAs comprise a nucleic acid sequence comprising three segments; (E) a plurality of amplifiers (AMPs), wherein the AMPs comprise a nucleic acid sequence comprising two segments; and (F) a plurality of label probes (LPs), wherein the LPs comprise a nucleic acid sequence comprising two segments.
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9.
公开(公告)号:US20230151413A1
公开(公告)日:2023-05-18
申请号:US18046770
申请日:2022-10-14
Applicant: ADVANCED CELL DIAGNOSTICS, INC.
Inventor: Yuling Luo , Shiping Chen
IPC: C12Q1/6837 , C12Q1/682 , C12Q1/6841
CPC classification number: C12Q1/6837 , C12Q1/682 , C12Q1/6841
Abstract: Methods of detecting multiple nucleic acid targets in single cells through indirect capture of labels to nucleic acid are provided. Methods of assaying the relative levels of nucleic acid targets through normalization to levels of reference nucleic acids are also provided. Methods of detecting individual cells, particularly rare cells from large heterogeneous cell populations through detection of nucleic acids are described. Related compositions, systems, and kits are also provided.
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10.
公开(公告)号:US20170101672A1
公开(公告)日:2017-04-13
申请号:US15291054
申请日:2016-10-11
Applicant: Advanced Cell Diagnostics, Inc.
Inventor: Yuling Luo , Xingyong Wu , Liuliu Pan , Xiaoming Wang , Xiao-Jun Ma , Nan Su , Steve Chen
IPC: C12Q1/68
CPC classification number: C12Q1/6841 , C12Q1/682 , C12Q1/6827 , C12Q2565/102 , C12Q2525/313
Abstract: The invention relates to methods of in situ detection of a nucleic acid variation of a target nucleic acid in a sample, including single nucleotide variations, multi-nucleotide variations or splice sites. The method can comprise the steps of contacting the sample with a probe that detects the nucleic acid variation or splice site and a neighbor probe; contacting the sample with pre-amplifiers that bind to the nucleic acid variation probe or splice site probe and neighbor probe, respectively; contacting the sample with a collaboration amplifier that binds to the pre-amplifiers; and contacting the sample with a label probe system, wherein hybridization of the components forms a signal generating complex (SGC) comprising a target nucleic acid with the nucleic acid variation or splice site, the probes and amplifiers; and detecting in situ signal from the SGC on the sample. The invention also provides samples, tissue slides, and kits relating to detection of nucleic acid variations, including single nucleotide variations, multi-nucleotide variations or splice sites, of a target nucleic acid.
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