-
公开(公告)号:AU2015202111B9
公开(公告)日:2017-07-27
申请号:AU2015202111
申请日:2015-04-24
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TRAVERS KEVIN , OTTO GEOFF , TURNER STEPHEN , HEINER CHERYL , MA CONGCONG
IPC: C12Q1/68
Abstract: Compositions and methods for nucleic acid sequencing include template constructs that comprise double stranded portions in a partially or completely contiguous constructs, to provide for redundant sequence determination through one or both of sequencing sense and antisense strands, and iteratively sequencing the entire construct multiple times. Additional sequence components are also optionally included within such template constructs. Methods are also provided for the use and preparation of these constructs as well as sequencing compositions for their application.
-
公开(公告)号:AU2009251881B2
公开(公告)日:2015-03-26
申请号:AU2009251881
申请日:2009-03-30
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TURNER STEPHEN , CHRISTIANS FRED , FEHR ADRIAN , FLUSBERG BENJAMIN , EMIG ROBIN , DALAL RAVI , KORLACH JONAS , LIN STEVEN , EID JOHN
Abstract: Methods, compositions and arrays for non-random loading of single analyte molecules into array structures are provided.
-
公开(公告)号:AU2014202286B2
公开(公告)日:2015-01-29
申请号:AU2014202286
申请日:2014-04-28
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: MCCAFFREY NATHANIEL JOSEPH , TURNER STEPHEN , SAXENA RAVI , HELGESEN SCOTT EDWARD
IPC: G01N21/00
Abstract: An analytical assembly within a unified device structure for integration into an analytical system. The analytical assembly is scalable and includes a plurality of analytical devices, each of which includes a reaction cell, an optical sensor, and at least one optical element positioned in optical communication with both the reaction cell and the sensor and which delivers optical signals from the cell to the sensor. Additional elements are optionally integrated into the analytical assembly. Methods for forming and operating the analytical system are also disclosed.
-
公开(公告)号:AU2011217862B9
公开(公告)日:2014-07-10
申请号:AU2011217862
申请日:2011-02-18
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: MCCAFFREY NATHANIEL JOSEPH , TURNER STEPHEN , SAXENA RAVI , HELGESEN SCOTT EDWARD
Abstract: A sequencing chip and a corresponding method for distinguishing fluorescently labelled species at a single molecule level, the chip comprising:a plurality of analytical devices, each analytical device having a reaction cell, an optical element and a detection element, wherein a sample is disposed at the reaction cell, and the optical element is in optical communication with the reaction cell and the detection element;a plurality of sources emitting at different wavelengths at different times; andone or more integrated waveguides in optical communication with the reaction cells to deliver a pulsed illumination to the reaction cells, wherein the pulsed illumination comprises two or more pulses at different wavelengths and different times, and the different wavelengths correspond to different excitation spectra of a plurality of fluorophores;wherein for each analytical device in the plurality of analytical devices:the pulsed illumination produces excitation events from the sample at the reaction cell, each excitation event producing an emitted signal;the optical element delivers the emitted signals to the detection element; andthe detection element detects the emitted signals by correlating the timing of the emitted signals detected at the detection element with the timing of the excitation events, thereby identifying whether any fluorophore in the plurality of fluorophores is present or absent in the reaction cell..
-
公开(公告)号:AU2011224119B2
公开(公告)日:2014-03-06
申请号:AU2011224119
申请日:2011-09-19
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TURNER STEPHEN , KORLACH JONAS
Abstract: The present invention relates to optical confinements, method of preparing and methods of using them for analyzing molecules and/or monitoring chemical reactions. The apparatus and methods embodied in the present invention are particularly useful for high-throughput and low-cost single-molecular analysis.
-
公开(公告)号:AU2013240166A1
公开(公告)日:2014-10-30
申请号:AU2013240166
申请日:2013-03-18
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: KORLACH JONAS , TURNER STEPHEN , CLARK TYSON A
Abstract: Methods, compositions, and systems are provided for characterization of modified nucleic acids. In certain preferred embodiments, single molecule sequencing methods are provided for identification of modified nucleotides within nucleic acid sequences. Modifications detectable by the methods provided herein include chemically modified bases, enzymatically modified bases, a basic sites, non-natural bases, secondary structures, and agents bound to a template nucleic acid.
-
公开(公告)号:AU2007289057C1
公开(公告)日:2014-01-16
申请号:AU2007289057
申请日:2007-08-31
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: LUNDQUIST PAUL , TURNER STEPHEN
IPC: F21V9/16
Abstract: Substrates, systems and methods for analyzing materials that include waveguide arrays disposed upon or within the substrate such that evanescent fields emanating from the waveguides illuminate materials disposed upon or proximal to the surface of the substrate, permitting analysis of such materials. The substrates, systems and methods are used in a variety of analytical operations, including, inter alia, nucleic acid analysis, including hybridization and sequencing analyses, cellular analyses and other molecular analyses.
-
18.
公开(公告)号:AU2011202922A1
公开(公告)日:2011-07-07
申请号:AU2011202922
申请日:2011-06-17
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: LUNDQUIST PAUL , ZACCARIN DENIS , LACROIX YVES , TURNER STEPHEN , DIXON JOHN
IPC: G01J3/30
Abstract: Methods and systems for real-time monitoring of optical signals from arrays of signal sources, and particularly optical signal sources that have spectrally different signal components. Systems include signal source arrays in optical communication with optical trains that direct excitation radiation to and emitted signals from such arrays and image the signals onto detector arrays, from which such signals may be subjected to additional processing. Methods and systems for real-time monitoring of optical signals from arrays of signal sources, and particularly optical signal sources that have spectrally different signal components. Systems include signal source arrays in optical communication with optical trains that direct excitation radiation to and emitted signals from such arrays and image the signals onto detector arrays, from which such signals may be subjected to additional.
-
19.
公开(公告)号:AU2007215173B2
公开(公告)日:2011-04-28
申请号:AU2007215173
申请日:2007-02-09
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: DIXON JOHN , LUNDQUIST PAUL , TURNER STEPHEN , ZACCARIN DENIS , LACROIX YVES
IPC: G01J3/30
Abstract: Methods and systems for real-time monitoring of optical signals from arrays of signal sources, and particularly optical signal sources that have spectrally different signal components. Systems include signal source arrays in optical communication with optical trains that direct excitation radiation to and emitted signals from such arrays and image the signals onto detector arrays, from which such signals may be subjected to additional processing.
-
公开(公告)号:CA2991818A1
公开(公告)日:2009-10-01
申请号:CA2991818
申请日:2009-03-27
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TRAVERS KEVIN , OTTO GEOFF , TURNER STEPHEN , HEINER CHERYL , MA CONGCONG
IPC: C12Q1/6869 , G16B30/00 , C12Q1/6806 , G16B30/10
Abstract: Compositions for nucleic acid sequencing are provided that include template constructs that comprise double stranded portions in partially or completely contiguous constructs, to provide for redundant sequence determination through one or both of sequencing sense and antisense strands, and iteratively sequencing the entire construct multiple times. Additional sequence components are also optionally included within such template constructs. Methods are also provided for the use and preparation of these constructs as well as sequencing compositions for their application.
-
-
-
-
-
-
-
-
-