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公开(公告)号:WO2013056241A3
公开(公告)日:2013-06-20
申请号:PCT/US2012060275
申请日:2012-10-15
Applicant: PACIFIC BIOSCIENCES CALIFORNIA
Inventor: KORLACH JONAS , TURNER STEPHEN , SUN LEI
CPC classification number: C12Q1/6869 , B82Y15/00 , C12Q1/001 , C12Q2521/543 , C12Q2563/113 , C12Q2565/607 , C40B60/10 , G01N27/00 , G01N27/3277 , G01N27/3278 , C12Q2563/155
Abstract: Real time redox sequencing methods, devices, and systems are described. Arrays of redox devices comprising one or two electrodes are used to provide sequence information about a template nucleic acid in a polymerase-template complex bound proximate to the electrode(s). A sequencing reaction mixture comprising nucleotide analogs comprising redox labels is introduced to the array of redox devices under conditions of polymerase mediated nucleic acid synthesis. The time sequence of incorporation of nucleotide analogs is determined by electrochemically identifying the redox labels of the nucleotide analogs that are incorporated into the growing strand.
Abstract translation: 描述了实时氧化还原测序方法,设备和系统。 使用包含一个或两个电极的氧化还原装置的阵列来提供关于靠近电极的聚合酶 - 模板复合物中的模板核酸的序列信息。 将包含氧化还原标记的核苷酸类似物的测序反应混合物在聚合酶介导的核酸合成的条件下引入到氧化还原装置阵列中。 通过电化学鉴定掺入生长链中的核苷酸类似物的氧化还原标记来确定核苷酸类似物的掺入时间序列。
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公开(公告)号:WO2010033193A3
公开(公告)日:2010-06-10
申请号:PCT/US2009005168
申请日:2009-09-15
Applicant: PACIFIC BIOSCIENCES CALIFORNIA , ZHONG CHENG FRANK , LUNDQUIST PAUL , FOQUET MATHIEU , KORLACH JONAS , BAYANDORIAN HOVIG
Inventor: ZHONG CHENG FRANK , LUNDQUIST PAUL , FOQUET MATHIEU , KORLACH JONAS , BAYANDORIAN HOVIG
IPC: G01N21/00 , G01B9/02 , G01N33/483
CPC classification number: C12Q1/6874 , C12Q1/68 , C12Q1/6825 , G01N21/6428 , G01N21/648 , G01N21/7703 , G01N33/54373 , G01N2021/6463 , G01N2201/06113 , G01N2201/0638 , G01N2201/08
Abstract: This invention provides substrates for use in various applications, including single-molecule analytical reactions. Methods for propagating optical energy within a substrate are provided. Devices comprising waveguide substrates and dielectric omnidirectional reflectors are provided. Waveguide substrates with improved uniformity of optical energy intensity across one or more waveguides and enhanced waveguide illumination efficiency within an analytic detection region of the arrays are provided.
Abstract translation: 本发明提供用于各种应用的底物,包括单分子分析反应。 提供了在基板内传播光能的方法。 提供了包括波导基板和电介质全向反射器的装置。 提供了在阵列的分析检测区域内改善一个或多个波导上的光能强度的均匀性以及增强的波导照明效率的波导基板。
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公开(公告)号:WO2006044078A3
公开(公告)日:2008-02-21
申请号:PCT/US2005033052
申请日:2005-09-16
Applicant: PACIFIC BIOSCIENCES CALIFORNIA , TURNER STEPHEN , KORLACH JONAS
Inventor: TURNER STEPHEN , KORLACH JONAS
CPC classification number: G01N21/6452 , B01L3/5085 , B01L2200/0668 , B01L2300/0654 , B01L2300/0896 , B82Y20/00 , B82Y30/00 , G02B6/13 , Y10T436/10
Abstract: The present invention relates to optical confinements, method of preparing and methods of using them for analyzing molecules and/or monitoring chemical reactions. The apparatus and methods embodied in the present invention are particularly useful for high-throughput and low-cost single-molecular analysis.
Abstract translation: 本发明涉及光学限制,其制备方法和使用它们分析分子和/或监测化学反应的方法。 本发明中体现的装置和方法对于高通量和低成本的单分子分析特别有用。
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公开(公告)号:CA2720247C
公开(公告)日:2020-07-14
申请号:CA2720247
申请日:2009-03-30
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: EID JOHN , TURNER STEPHEN , DALAL RAVI , FLUSBERG BENJAMIN , KORLACH JONAS , LIN STEVEN , FEHR ADRIAN , CHRISTIANS FRED , EMIG ROBIN
Abstract: Methods, compositions and arrays for non-random loading of single analyte molecules into array structures are provided.
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公开(公告)号:AU2009251881B2
公开(公告)日:2015-03-26
申请号:AU2009251881
申请日:2009-03-30
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TURNER STEPHEN , CHRISTIANS FRED , FEHR ADRIAN , FLUSBERG BENJAMIN , EMIG ROBIN , DALAL RAVI , KORLACH JONAS , LIN STEVEN , EID JOHN
Abstract: Methods, compositions and arrays for non-random loading of single analyte molecules into array structures are provided.
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公开(公告)号:AU2008331824B2
公开(公告)日:2014-07-24
申请号:AU2008331824
申请日:2008-12-03
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: FLUSBERG BENJAMIN , EID JOHN , OTTO GEOFF , KORLACH JONAS , ROITMAN DANIEL , HARDENBOL PAUL
IPC: G01N33/53 , G01N33/535 , G01N33/573
Abstract: Systems and methods of enhancing fluorescent labeling strategies as well as systems and methods of using non-fluorescent and/or non-optic labeling strategies, e.g., as with single molecule sequencing using ZMWs, are described.
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公开(公告)号:AU2012216605B2
公开(公告)日:2014-06-12
申请号:AU2012216605
申请日:2012-09-03
Applicant: PACIFIC BIOSCIENCES CALIFORNIA
Inventor: RANK DAVID R , WEGENER JEFFERY , KORLACH JONAS , ROITMAN DANIEL , XU YUE , LYLE JOHN , TURNER STEPHEN , PELUSO PAUL , OTTO GEOFF , CICERO RONALD L
Abstract: Methods of producing substrates having selected active chemical regions by employing elements of the substrates in assisting the localization of active chemical groups in desired regions of the substrate. The methods may include optical, chemical and/or mechanical processes for the deposition, removal, activation and/or deactivation of chemical groups in selected regions of the substrate to provide selective active regions of the substrate.
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公开(公告)号:AU2011224119B2
公开(公告)日:2014-03-06
申请号:AU2011224119
申请日:2011-09-19
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: TURNER STEPHEN , KORLACH JONAS
Abstract: The present invention relates to optical confinements, method of preparing and methods of using them for analyzing molecules and/or monitoring chemical reactions. The apparatus and methods embodied in the present invention are particularly useful for high-throughput and low-cost single-molecular analysis.
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公开(公告)号:CA2974241A1
公开(公告)日:2010-03-25
申请号:CA2974241
申请日:2009-09-15
Applicant: PACIFIC BIOSCIENCES CALIFORNIA INC
Inventor: ZHONG CHENG FRANK , LUNDQUIST PAUL , FOQUET MATHIEU , KORLACH JONAS , BAYANDORIAN HOVIG
IPC: G01N21/17 , B82Y20/00 , C12M1/34 , C12Q1/00 , C12Q1/68 , G01N21/00 , G01N21/63 , G01N21/77 , G02B6/12
Abstract: This specification provides substrates for use in various applications, including single-molecule analytical reactions. Methods for propagating optical energy within a substrate are provided. Devices comprising waveguide substrates and dielectric omnidirectional reflectors are provided. Waveguide substrates with improved uniformity of optical energy intensity across one or more waveguides and enhanced waveguide illumination efficiency within an analytic detection region of the arrays are provided.
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公开(公告)号:AU2006320739A1
公开(公告)日:2007-06-07
申请号:AU2006320739
申请日:2006-11-27
Applicant: PACIFIC BIOSCIENCES CALIFORNIA
Inventor: KORLACH JONAS
IPC: C23C16/00
Abstract: Devices, systems and methods of using same where hybrid substrate materials are provided with a substantially uniform surface to provide uniformity of properties, including interaction with their environments. Uniform surfaces are applied as coatings over, e.g., hybrid metal/silica, metal/polymer, metal/metal surfaces to mask different chemical properties of differing regions of the surface and to afford a protective surface for the hybrid structure.
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