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公开(公告)号:WO2016127124A3
公开(公告)日:2016-09-29
申请号:PCT/US2016016882
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , WESSEL THOMAS , WOO DAVID
CPC classification number: G01N21/6428 , C12Q1/6851 , C12Q1/686 , G01N21/274 , G01N21/278 , G01N21/6452 , G01N21/6456 , G01N2021/6439 , G01N2021/6471 , G01N2201/127 , G01N2201/13 , G01N2333/922
Abstract: In one exemplary embodiment, a method (100) for calibrating an instrument is provided. The instrument includes an optical system capable of imaging florescence emission from a plurality of reaction sites. The method includes performing a region-of-interest (ROI) calibration (102) to determine reaction site positions in an image. The method further includes performing a pure dye calibration (108) to determine the contribution of a fluorescent dye used in each reaction site by comparing a raw spectrum of the fluorescent dye to a pure spectrum calibration data of the fluorescent dye. The method further includes performing an instrument normalization calibration (110) to determine a filter normalization factor. The method includes performing an RNase P validation (112) to validate the instrument is capable of distinguishing between two different quantities of sample.
Abstract translation: 在一个示例性实施例中,提供了一种用于校准仪器的方法(100)。 该仪器包括能够成像来自多个反应位点的荧光发射的光学系统。 该方法包括执行感兴趣区域(ROI)校准(102)以确定图像中的反应位置位置。 该方法还包括通过将荧光染料的原始光谱与荧光染料的纯光谱校准数据进行比较来执行纯染料校准(108)以确定在每个反应位点中使用的荧光染料的贡献。 该方法还包括执行仪器归一化校准(110)以确定滤波器归一化因子。 该方法包括执行RNase P验证(112)以验证仪器能够区分两种不同数量的样品。
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公开(公告)号:SG10202001197UA
公开(公告)日:2020-03-30
申请号:SG10202001197U
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , CHEN MINGSONG , TOH TIONG HAN , AGUANNO MAURO , LAU LIK SENG , LOH LIAN SENG , TEO KOK SIONG , CHU ZENG WEI , MATHERS XIN , UY MICHAEL , YEO HUEI STEVEN , BOO KUAN MOON , LEE WAY XUANG , KOO CHIN YONG , TEO WEI FUH , LAU SOO YONG , SHIN HON SIU , TAN ZEQI , WESSEL THOMAS , WOO DAVID
Abstract: A biological analysis system is provided. The system comprises a sample block assembly. The sample block assembly comprises a sample block configured to accommodate a sample holder, the sample holder configured to receive a plurality of samples. The system also comprises a control system configured to cycle the plurality of samples through a series of temperatures. The system further comprises an automated tray comprising a slide assembly, the tray configured to reversibly slide the sample block assembly from a closed to an open position to allow user access to the plurality of sample holders.
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公开(公告)号:WO2016127107A3
公开(公告)日:2016-11-03
申请号:PCT/US2016016856
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , CHEN MINGSONG , TOH TIONG HAN , AGUANNO MAURO , LAU LIK SENG , LOH LIAN SENG , TEO KOK SIONG , CHU ZENG WEI , MATHERS XIN , UY MICHAEL , YEO HUEI STEVEN , BOO KUAN MOON , LEE WAY XUANG , KOO CHIN YONG , TEO WEI FUH , LAU SOO YONG , SHIN HON SIU , TAN ZEQI , WESSEL THOMAS , WOO DAVID
CPC classification number: B01L7/52 , B01L2200/145 , B01L2300/18 , B01L2300/1822 , C12Q1/6806 , G01N21/274 , G01N21/6452 , G01N21/6486 , G01N35/026 , G01N2021/6439 , G01N2035/00316 , G01N2035/00366 , G01N2201/061 , G01N2201/12
Abstract: A biological analysis system (100) is provided. The system comprises a sample block assembly. The sample block assembly comprises a sample block (114) configured to accommodate a sample holder, the sample holder configured to receive a plurality of samples. The system also comprises a control system configured to cycle the plurality of samples through a series of temperatures. The system further comprises an automated tray (160) comprising a slide assembly, the tray (160) configured to reversibly slide the sample block assembly from a closed to an open position to allow user access to the plurality of sample holders.
Abstract translation: 提供生物分析系统(100)。 该系统包括样品块组件。 样品块组件包括被配置为容纳样品架的样品块(114),样品保持器被配置为接收多个样品。 该系统还包括配置成使多个样品循环通过一系列温度的控制系统。 所述系统还包括自动托盘(160),其包括滑动组件,所述托盘(160)构造成可将样品块组件从关闭位置可逆地滑动到打开位置,以允许用户接近所述多个样品保持器。
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公开(公告)号:SG11201706341RA
公开(公告)日:2017-09-28
申请号:SG11201706341R
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , CHEN MINGSONG , TOH TIONG HAN , AGUANNO MAURO , LAU LIK SENG , LOH LIAN SENG , TEO KOK SIONG , CHU ZENG WEI , MATHERS XIN , UY MICHAEL , YEO HUEI STEVEN , BOO KUAN MOON , LEE WAY XUANG , KOO CHIN YONG , TEO WEI FUH , LAU SOO YONG , SHIN HON SIU , TAN ZEQI , WESSEL THOMAS , WOO DAVID
Abstract: A biological analysis system is provided. The system comprises a sample block assembly. The sample block assembly comprises a sample block configured to accommodate a sample holder, the sample holder configured to receive a plurality of samples. The system also comprises a control system configured to cycle the plurality of samples through a series of temperatures. The system further comprises an automated tray comprising a slide assembly, the tray configured to reversibly slide the sample block assembly from a closed to an open position to allow user access to the plurality of sample holders.
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公开(公告)号:RU2702577C2
公开(公告)日:2019-10-08
申请号:RU2017131209
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , CHEN MINGSONG , TOH TIONG HAN , AGUANNO MAURO , LAU LIK SENG , LOH LIAN SENG , TEO KOK SIONG , CHU ZENG WEI , MATHERS XIN , UY MICHAEL , YEO HUEI STEVEN , BOO KUAN MOON , LEE WAY XUANG , KOO CHIN YONG , TEO WEI FUH , LAU SOO YONG , SHIN HON SIU , TAN ZEQI , WESSEL THOMAS , WOO DAVID
Abstract: Изобретениев целомкасаетсясистем, устройстви способовнаблюдения, испытанияи/илианализаодногоилинесколькихбиологическихпроб. Системадлябиологическогоанализа, содержащая: узелблокапробоподготовки, которыйсодержитблокпробоподготовки, выполненныйс возможностьювмещениядержателяпроб, причемдержательпробвыполненс возможностьюприемамножествапроб; системууправления, выполненнуюс возможностьюциклированиямножествапробпорядутемператур; иавтоматизированныйлоток, содержащийподвижныйузел, причемлотоквыполненс возможностьюреверсивногоскользящегоперемещенияузлаблокапробоподготовкииззакрытойв открытуюпозициюдляобеспечениядоступапользователякомножествудержателейпроб; лотокилиузелблокапробоподготовкидополнительносодержитпластинку, выполненнуюс возможностьюблокированиясвета, излучаемогоотпозиционногодатчика. Техническийрезультат– повышениеэффективностианализабиологическихпроб. 3 н. и 15 з.п. ф-лы.
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公开(公告)号:SG11201706352QA
公开(公告)日:2017-09-28
申请号:SG11201706352Q
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , FREUDENTHAL JACOB , MARKS JEFFREY
Abstract: Some embodiments describe a computer-implemented method for calibrating a fluorescent dye. The method can comprise imaging a sample holder, loaded into an instrument, at more than one channel. The sample holder can comprise a plurality of reaction sites and more than one dye type, with each dye occupying more than one reaction site. The method can further comprise identifying a peak channel for each dye on the sample holder, normalizing each channel to the peak channel for each dye, and producing a dye matrix that can comprise a set of dye reference values.
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公开(公告)号:SG11201706332RA
公开(公告)日:2017-09-28
申请号:SG11201706332R
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , WESSEL THOMAS , WOO DAVID
Abstract: In one exemplary embodiment, a method for calibrating an instrument is provided. The instrument includes an optical system capable of imaging fluorescence emission from a plurality of reaction sites. The method includes performing a region-of-interest (ROI) calibration to determine reaction site positions in an image. The method further includes performing a pure dye calibration to determine the contribution of a fluorescent dye used in each reaction site by comparing a raw spectrum of the fluorescent dye to a pure spectrum calibration data of the fluorescent dye. The method further includes performing an instrument normalization calibration to determine a filter normalization factor. The method includes performing an RNase P validation to validate the instrument is capable of distinguishing between two different quantities of sample.
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公开(公告)号:SG11202101612SA
公开(公告)日:2021-03-30
申请号:SG11202101612S
申请日:2019-08-29
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MAJUMBAR NIVEDITA , ALIMINATI MANJULA , CHEN YONGZHI , PAPENFUSS KEVIN
Abstract: A system and methods are provided for image driven quality control for array based PCR. The system comprises a PCR unit, a reaction array plate, a convolutional neural network (CNN) configured to receive a sequence of images of the reaction array plate in the PCR system, and an output of the CNN coupled to a control for the reaction array plate. The method comprises applying a sequence of images from a plurality of subarrays of the reaction array plate to a plurality of CNNs during operation of the PCR system on the reaction plate array, operating the CNNs to generate failure mode predictions for the reaction plate based on the sequence of images, and coupling an output of the CNNs to one or more of a setting for manufacture of the reaction array plate or to control the PCR system.
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公开(公告)号:RU2716171C2
公开(公告)日:2020-03-06
申请号:RU2017131046
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG , MARKS JEFFREY , FREUDENTHAL JACOB , WESSEL THOMAS , WOO DAVID
IPC: G01N21/27
Abstract: Группаизобретенийотноситсяк областиизмерительнойтехники. Способдлякалибровкиприбора, включающегов себяоптическуюсистемус возможностьювизуализациифлуоресцентногоизлученияотмножествареакционныхучастков, такихкаклункидержателяпроб, включает: проведениекалибровкиобластиинтереса (ОИ) дляопределенияпозицийреакционныхучастковнаизображении, причемкалибровкаОИуменьшаетошибкиопределенияреакционныхучастковпутемминимизациипоменьшеймереодногофактораизследующейгруппы: насыщениекрасителявомножествереакционныхучастков, вращениесетки, вариациякоэффициентовусиленияи оптическаярадиальнаядисторсия; проведениекалибровкичистогокрасителядляопределениявкладафлуоресцентногокрасителя, применяемогов каждомреакционномучастке, путемсравненияисходногоспектрафлуоресцентногокрасителяс калибровочнымиданнымичистогоспектрафлуоресцентногокрасителя, приэтомреакционныеучасткисодержатодинаковыеконцентрациикрасителя, чтобыобеспечитьполучениечистыхспектральныхзначенийдлякаждойлункидержателяпроб, адержательпробпредставляетсобойкалибровочныйпланшетс шахматнойконфигурацией; проведениекалибровкинормализацииприборадляопределениякоэффициентанормализациидляфильтра; ипроведениевалидациис помощьюРНКазыР длявалидациивозможностиприбораразличатьдваразныхколичестваоднойпробы. Техническийрезультатзаключаетсяв обеспеченииустойчивостик принятиюсубоптимальныхкалибровок, улучшенииобъективностии единообразиявовремяосуществлениятакойдеятельности. 4 н. и 35 з.п. ф-лы, 23 ил., 1 табл.
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公开(公告)号:SG11201706329WA
公开(公告)日:2017-09-28
申请号:SG11201706329W
申请日:2016-02-05
Applicant: LIFE TECHNOLOGIES CORP
Inventor: CHU YONG
Abstract: The present teachings relate to a method and system for determining Regions of Interest (ROI) for one or more biological samples in a laboratory instrument. The method can include an optical system capable of imaging florescence emission from a plurality of sample wells. An initial ROI, its center location and size can be estimated from the fluorescence detected from each well. From this information the average size of the ROIs can be determined and global gridding models can be derived to better locate each of the ROIs. The global gridding models can then be applied to the ROIs to improve the precision of the ROI center locations. Sample wells not originally providing fluorescence ROIs can be recovered through the use of mapping functions. The radius of each ROI can then be adjusted to improve the signal-to-noise ratio of the optical system.
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